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Category Archives: News

Oct. 2016: Talk@Computational RNA Biology at Cambridge.

By saviran | October 29, 2016 - 4:52 pm |October 29, 2016 News
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Mirko gave a talk on his joint work with Fei on RNAprob at the second Computational RNA Biology meeting at Cambridge. 

June 2016: New paper RNAprob@RNA.

By saviran | October 29, 2016 - 4:48 pm |October 29, 2016 News
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Our paper on a probabilistic approach to data-directed RNA secondary structure prediction is out in RNA. See our publications page to read the paper and download the software.

Sept. 2016: Collaboration with the Ding lab is published @Bioinformatics.

By saviran | October 29, 2016 - 4:40 pm |October 29, 2016 News
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FoldAtlas is a web server for browsing transcriptome-wide RNA structural profiling data and visualizing respective predicted data-directed secondary structures. See our publications page to read the paper and download the software.

July 2016: The Aviran lab welcomes our undergraduate summer intern, Huan Chen.

By saviran | October 29, 2016 - 4:24 pm |October 29, 2016 News
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Aug. 2016: our rapid quality control metrics paper is out @Bioinformatics.

By saviran | October 29, 2016 - 4:19 pm |October 29, 2016 News
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Our new methods for scalable quality assessment and experiment design is out in Bioinformatics. See our publications page to read the paper and download accompanying software.

Sept. 2016: New paper SEQualyzer@Bioinformatics.

By saviran | October 29, 2016 - 4:15 pm |October 29, 2016 News
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Our paper on the new SEQualyzer platform for structural profiling data exploration and quality control is out in Bioinformatics. See our publications page to read the paper and download the software.

 

Sept. 2016: Congratulations Mirko on passing your Qual Exam!

By saviran | October 29, 2016 - 4:08 pm |October 29, 2016 News
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June 2016: Congratulations Hua on passing your Qual Exam!

By saviran | October 29, 2016 - 4:07 pm |October 29, 2016 News
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June 2016: Congratulations Krishna on passing your Qual Exam!

By saviran | October 29, 2016 - 12:18 pm |October 29, 2016 News
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June 2016: Sana was awarded NIH training fellowship from the UC Davis Biotechnology Program. Congratulations Sana.

By saviran | October 29, 2016 - 12:15 pm |October 29, 2016 News
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    • What We Do

          We develop computational methods for inferring RNA dynamics from experiments and theory, with applications ranging from basic research to bimolecular engineering and synthetic biology.

    • Recent News

      Feb. 2018: New paper on reconstruction of complex RNA structure landscapes in Nature Communications.  ———————————————- March 2018: PATTERNA, a new algorithm that mines RNA structures from large-scale structure profiling datasets, in Genome Biology.   

  • Our Research

    • Computational Molecular Biology
    • Genomic Big Data Analysis
    • Probabilistic Modeling
    • Statistical Signal Processing
    • Structural Genomics
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